BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D07SP1|AL428897
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1716 1825 0.0
>3x_Contig1716
Length = 19108
Score = 1825 bits (920), Expect = 0.0
Identities = 921/922 (99%)
Strand = Plus / Minus
Query: 1 gatcttcgaattgaatgaggaagtggatgacgttgaaattatgggactacagttatccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2150 gatcttcgaattgaatgaggaagtggatgacgttgaaattatgggactacagttatccga 2091
Query: 61 tgacttgcatgatgctgttttgaaattacgtttgatcaagaaagaaatgcaggaagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2090 tgacttgcatgatgctgttttgaaattacgtttgatcaagaaagaaatgcaggaagaaaa 2031
Query: 121 agtgaagagtgtacaatgtgaacacaaagaaagtgtgcacaagaaagaaccatctgaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2030 agtgaagagtgtacaatgtgaacacaaagaaagtgtgcacaagaaagaaccatctgaatt 1971
Query: 181 tgaaactaaaaaaccttcccaagtcacagagagtaaagaaatcctcaaaaggaaaaaccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1970 tgaaactaaaaaaccttcccaagtcacagagagtaaagaaatcctcaaaaggaaaaaccg 1911
Query: 241 ccattatcatcaccaccactctaaaaacgagcccagaaataagacaaagagcaactccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1910 ccattatcatcaccaccactctaaaaacgagcccagaaataagacaaagagcaactccag 1851
Query: 301 aaaggtcaaaaaagttgaaaaagaattacccacttcggatgacgacaacacacagctaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1850 aaaggtcaaaaaagttgaaaaagaattacccacttcggatgacgacaacacacagctaga 1791
Query: 361 agcatcgaagcctaaagcctttaagatcgacgtcctctttgactctagtgattctgaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1790 agcatcgaagcctaaagcctttaagatcgacgtcctctttgactctagtgattctgaaaa 1731
Query: 421 gtcagagaataatgtcaactccagtaacaactacgacaatggagtttctccacccagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1730 gtcagagaataatgtcaactccagtaacaactacgacaatggagtttctccacccagaag 1671
Query: 481 aaactccgcctcaagtgttaactcagtagtattggaagaagttgaagacgaagaggtaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1670 aaactccgcctcaagtgttaactcagtagtattggaagaagttgaagacgaagaggtaag 1611
Query: 541 aagatggcaaaaatcgttgacgcaaacaccttctggtcactccgttttagaggatgtgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1610 aagatggcaaaaatcgttgacgcaaacaccttctggtcactccgttttagaggatgtgta 1551
Query: 601 gaatagcataatttaaatwatttacgaagaaatagatgtccgttgatggataagttttag 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1550 gaatagcataatttaaataatttacgaagaaatagatgtccgttgatggataagttttag 1491
Query: 661 ttgttcatagccggcttgaggttaacctttcatgatacaatttctttcttggtggttaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 ttgttcatagccggcttgaggttaacctttcatgatacaatttctttcttggtggttaca 1431
Query: 721 ttttcaactattcaataactttggaccttcaaaagcattcgattaccataaatgattaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 ttttcaactattcaataactttggaccttcaaaagcattcgattaccataaatgattaat 1371
Query: 781 ttattacttttttttgttggcatcatttgcaatatagagcaagaaaagtcatgccactgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1370 ttattacttttttttgttggcatcatttgcaatatagagcaagaaaagtcatgccactgt 1311
Query: 841 cagcacaatatagtacaaatgccagtagcttcctttcagaaaatacattgggcgtgtggc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 cagcacaatatagtacaaatgccagtagcttcctttcagaaaatacattgggcgtgtggc 1251
Query: 901 gtagttggtagcgcgctccctt 922
||||||||||||||||||||||
Sbjct: 1250 gtagttggtagcgcgctccctt 1229
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8503
Number of Sequences: 1807
Number of extensions: 8503
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)